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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mec-9
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLPPPHKLF PFFLVFLNLV DTKDEPVFVK NNEDICLEDV DPGPCQYYQV QWFWDKQVEE  60
   61 CKEFHYGGCM GTKNRFSSKQ QCVKQCKYKM FNPVAVPDLC LLDADQGHCG DERNGHWWYF 120
  121 FNQESGECEK FFYYGCGGND NKFYSLHMCR KVCGERLSPQ IACDHCDLRT SFCKSNSKFN 180
  181 YTCECRSGYE KNQYGECIDI DECRGYKAVC DRNAWCVNEI GSYKCECMAS YRGDGKHCTY 240
  241 VGLGRSSIDC KDCSMHATCM NGVCQCKEGY EGDGFNCTDV NECLRRPEMC NKNAECINRE 300
  301 GSFICTCLEG YAGNGYNCTV SKNSCLDKFD HDYKDTCGNE NWRPHFFFNH QTRMCEQFWY 360
  361 DGCRGRSRNI FSEYDTCTTM CEETNVLTRA EVCWDKFDMN YRNQCMNGQW QQRYYFDHAS 420
  421 LTCRQFWFDG CRSDSRNIFD DELTCQWLCE SQPMYKSRSC LEDFDEGLKK ECNGGRWRHQ 480
  481 WYFDKGSKKC FSFWYDGCKG ANENIFQDEL SCLHTCENPA KKDPKKPWHN NDKFKMKEII 540
  541 GDIYKPNLTD TCLAKNPCKN NGTCIFVWKK DTHYCKCQPG FHGNNCDKVV DYDPCAEKPC 600
  601 LNGATCQIKY NDDDVDEKPT FECFCAAGFG GPKCDQRPCE SNPCLNNGTC RTTKGYSTYF 660
  661 CECANGFGGK NCDVSIGNTP PEEKFGKNVE QISSGKEEWI AQMRQRLKET GGGIGGASGS 720
  721 GLKSENGTMG GSSGEKSGEK KSGKNKKSKA TQVADEPYKD PATRKREREE REKKEAEIQA 780
  781 AEEEEKQRKE YEEDAQRKKA EEMELEAKKA LEAANFGLKT DFSMSLLTIL MAFVLREF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle