YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE05168
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSLTLSFSL VFLTFVQARV IVDPVAFATY DDDTARNKFF PLAAAAYSSN PQTCLSAKFK  60
   61 NAQLRRQVNV QCDTGKNDIC SAYTALLAGN NAIVLSFRGT QGFLQLIEEA DKSVFQSQSQ 120
  121 WVAGGKVSKY FGDAFNKLWN GGMKDDFNNL FHNNPKFEVW VTGHSLGGAM ASLAASFLIA 180
  181 NNIVPGNQVK LVTYGQPRTG TTPFAVAHDA QMAYSYRVTH NRDIVPHIPN EGMEDYKHHK 240
  241 AEVFYKESMN AGASFKVCSS SDESNDCSNG LLITASVSDH LTYFTKDVSQ WGEAGCN

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	297	0.96