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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7506438
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSLRFTIL AVSAMIFFPV IVFIYVVEAH TSPKVIADDQ ERSYGVICDA GSTGTRLFVY  60
   61 NWISTSDSEL IQIEPVIYDN KPVMKKISPG LSTFGTKPAQ AAEYLRPLME LAERHIPEEK 120
  121 RPYTPVFIFA TAGMRLIPDE YVLIGQKEAV LKNLRNKLPK ITSMQVLKEH IRIIEGKWEG 180
  181 IYSWIAVNYA LGKFNKTATL DFPGTSPAHA RQKTVGMIDM GGASAQIAFE LPDTDSFSSI 240
  241 NVENINLGCR EDDSLFKYKL FVTTFLGYGV NEGIRKYEHM LLSKLKDQNG TVIQDDCMPL 300
  301 NLHKTVTLEN GENFVRRGTG NWNTCSNEVK KLLNPESSSE VCKAEAAKCY FGAVPAPSIP 360
  361 LSNIEMYGFS EYWYSTHDVL GLGGQYDAEN IAKKTQQYCS KRWSTIQAES KKQLYPRADE 420
  421 ERLRTQCFKS AWITSVLHDG FSVDKTHNKF QSVSTIAGQE VQWALGAMIY HMRFFPLRDS 480
  481 SRNLIVKETH SSSESLWAPL FFLSAVFCLF VLVCAKEQSV LCFDDKRRSS FGMSRSQYSY 540
  541 KMLKENRTSS SFLENFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle