YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	clec-265
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNLIFVIS LIASVFYCTN ALTCPTGTKI YNAKCYAALG MDMTRDNALA YCRKTYGPYA  60
   61 RLTTPLTYAE NNFVTEQVQL HANWHTWLEY VADGTYIVGD DGKPPIYTNF AVGEPFSVNV 120
  121 GYCITIGMNG YWYAQPCPDS HSVLCEFDLV PPTPKPVLTT TVKPSGFPSC VQKYLNFVPC 180
  181 QSGWEYYPPT CACFKIISNT TYYNAMNTCR SMGGTLASVH NAGEAAFINR LGVQANSYWV 240
  241 STATARDNII IGLTYNSDRG YFQWDDSTVF DYAQGFAPAE PADYTSQGQI ILNNPMGYAT 300
  301 YMRMGNCAYQ TCRYAACKRY VY

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	322	0.99