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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25513778
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGESVPVT KASLKEADEC GPEIRLSSEH NRHTLFSGTT VLQTRNYKGQ PVMIRILKTA  60
   61 LIESSVNLKA RVIRTGFSTL KGQLVRSIMY PKPQEKEALK DVMVFILVLG FIALIGFIYT 120
  121 VIEMVSRGES LKHIIIRSLD IITIVVPPAL PAAMSVGIIN ANSRLKKKKI FCTSPTTVNV 180
  181 CGLINVACFD KTGTLTEDGL DFNCLKAIRK NEDGKPEFTS EFEELDPVKL SAENANLNIV 240
  241 VAAASCHSLT RIDGTLHGDP LELILVEKSK WIIEEAVNSD EETQDFDTVQ PTVLRPPPEQ 300
  301 ATYHPENNEY SVIKQHPFNS ALQRMSVIIS TPSEHSAHDM MVFTKGSPEM IASLCIPDTI 360
  361 PEDYMEVVDE YAQRGFRLIA VASKAVHLNF AKALKTPRDI MESELEFLGL IVMENRLKDV 420
  421 TLSVINELSV ANIRCVMVTG DNLLTAMSVA RECGIIRPTK KAFLITHSKT EKDPLGRTKL 480
  481 FIKESVSSSE NDIDTDSEIG AKVSMCGDGA NDCAALKAAH AGISLSQAEA SIAAPFTSNV 540
  541 PDIRCVPTVI KEGRCALVTS YAVSKYMAAY SLNEFLSVML LYNDGTNISD GQFLYIDLVL 600
  601 ITLVALFLGN TEASRKLSGI PPPRRLATSA FYFSVFGQMF FNIITQTTGY LLVRGQSWYV 660
  661 PNPEELDNTT TMIGTTVFFT SCCMYLGYAF VYSKGHPYRR SVFTNWLLCG IIFVIGAINM 720
  721 VMIFTNMGFL MNLMGFVYVP STSMRFILLA ISLAGVFLSL LYEHFFVEKV VAIHFESCTV 780
  781 TMDLSSWFEF TMYDAVFLVV VLGFFFYWLT RSEQPLPAPP KELAPLPMSD MTVEELRKYD 840
  841 GVKNEHILFG LNGTIYDVTR GKGFYGPGKA YGTLAGHDAT RALGTMDQNA VSSEWDDHTG 900
  901 ISADEQETAN EWETQFKFKY LTVGRLVKNS SEKADYGNRK SFVRGAESLD SIINGGDEGT 960
  961 KKDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle