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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25513603
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSTRRQQEG GGADAETHTV YGTNLITNRN SQEDENVVEE AELKYGASHV IHLFVPVSLC  60
   61 MALVVFTMNT ITFYSQNNGR HLLYTPFVRE TDSIVEKGLM SLGNALVMLC VVVLMTVLLI 120
  121 VFYKYKFYKL IHGWLIVSSF LLLFLFTTIY VQEVLKSFDV SPSALLVLFG LGNYGVLGMM 180
  181 CIHWKGPLRL QQFYLITMSA LMALVFIKYL PEWTVWFVLF VISVWDLVAV LTPKGPLRYL 240
  241 VETAQERNEP IFPALIYSSG VIYPYVLVTA VENTTDPREP TSSDSNTSTA FPGEASCSSE 300
  301 TPKRPKVKRI PQKVQIESNT TASTTQNSGV RVERELAAER PTVQDANFHR HEEEERGVKL 360
  361 GLGDFIFYSV LLGKASSYFD WNTTIACYVA ILIGLCFTLV LLAVFKRALP ALPISIFSGL 420
  421 IFYFCTRWII TPFVTQVSQK CASDSFFALE VSSKCLFKVF QMFSSRHILS NVRPIIKNLD 480
  481 LTRGFSDRKT KYFDLNDLIK TVNVTYKTGV NLEETTTVES KYVVSFFVFF FKKLTFKLLL 540
  541 QDVTPSSNTK GTVVTLSGSP GTHNDFKYMK SFFEQKKIRL ICTNYPGSEF VTGGLHNSYT 600
  601 NQDRNSYMKS LMETLELKNV NRLIIMGHSR GGENALQLTS MLSNDENWPL VGAVMINSPG 660
  661 FAPHKGISKR MGTINFIISL IKRHNKTINS ILHPILHYFY NNLIGLRVSH GKVAAAAILP 720
  721 MQTFAFDEQK LSIDDLRAKP GIRAFYGYGS KDFLIDEHQS EEVAMYFSEE DHYVISNKQD 780
  781 AEKAIKEARK SFTTGKQFVT ANFKEEGHFL QKTYPEFIVE VVDSIFDADK EVDTKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle