YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE04416
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.57
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVLCLIAF SIGLTICHVS PPMVVGRPRD GLVAGDPAEG PTTEDKYMIY SDITQKVDHF  60
   61 SNGTNNGVWQ QRYQYNSKFY NKTTGYVFLM LGGEGSINVT NGDKWVRHEG ETMMKWVAEF 120
  121 QAAAFQVEHR FYGSKEYSPI GDQTTASMKL LTIDQALADI KEFITQMNAL YFKDDKPIWV 180
  181 TFGGSYPGSL SAFFRETYPE MTAGAVSSSS AVHVFVDYYE YAINTEKTYR TVSDSCGDVI 240
  241 KVAFQNLITK AYSGPDSRAL LKQRFKLKSN LKICFPKESN QISYLIKKFQ VDFSSVKSEP 300
  301 FKKIRHFSLC DNFDETKLSK SVQFFFQNVY GYFQGINQYT GDNRNNATRS GLGVPAACNL 360
  361 LNDKTIGDEI QRVIAVMNLY DSWYKPSDSG CRPNNYTAFI QAYSDTTMPD DDTISTRSWI 420
  421 WQTCTELGYY QTTDGGNGGI FGSTVPLDFF ADQCIDLFGP EYTLDNTFKL VDQVRTKYGG 480
  481 ADAYRGTNVC FPNGSFDPWQ GLGHTANITN NNVDSWLIDG TAHCADMYPA RDSDKQSLKD 540
  541 ARVRIHGHLS RWLSDAQAIR TAGSSNISIF AAVCLVMFKI LF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle