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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE04349
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLALKLFPL FLFLLLLLPI DSIPIIKSLL NPSTPHANSQ AYVETSDVTS QFTIYASNIS  60
   61 SCLFKTAVIP CECFLQVSND YRLEENGKLL SKFAVSPPDI KIFTPSTHEM LNELTVHILP 120
  121 KLCREDLSDI QLEYRSFQVF PGEEESSWKT VSAVAKTLKD TKTSLIFGCK HFSDPGYYRV 180
  181 SIRLSLVNYT VQADKWIVVN RTNQNALRLR EDSIFPHCSS DYTVGWSLAE CSMEHLHYRL 240
  241 RILAVPEGAK NHDDGAVYIE EIGIAPDMHH LKISCSQFDI IHEKYCFELV SVNRNSSVSH 300
  301 TWHSVCVSTE PVERKLGGWS AWSEWSACSE TCGSGRQRRV RFCNEPVPKR SKYCDGPLIE 360
  361 TQECTLTKCP EAMMPQSLST NCSCGCALSL EASSFFASSR HSRMCEGNQT WTLPKMDGFK 420
  421 IADFTIRKQG DAKGKLFFFL RAPYQELVWS SDSHQEYQFS LPMSAPIFVV LWSKSNDTAR 480
  481 LKQIDDGFTV SYSVRDADSS PTVAKIDSCQ PFCPETMAIA IMAIIFICII FIPPLVCAAV 540
  541 TASMRRNTSP EVPLMDNKYD SEMIRSGNTE STHVSSRNYV AKRSIGIQLS VQSTPRTARA 600
  601 CLSHESPVPP RGQSSLSECD ELEYDYYDGT TFPGSFLAPV QDVMYSQIDI DQVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle