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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE03998
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTLVQLRLE NKSNTKYEDL ILVGLIALSA VSVYCEEEEK TEKKETKYGT IIGIDLGTTY  60
   61 SCVGVYKNGR VEIIANDQGN RITPSYVAFS GDQGDRLIGD AAKNQLTINP ENTIFDAKRL 120
  121 IGRDYNDKTV QADIKHWPFK VIDKSNKPSV EVKVGSDNKQ FTPEEVSAMV LVKMKEIAES 180
  181 YLGKEVKNAV VTVPAYFNDA QRQATKDAGT IAGLNVVRII NEPTAAAIAY GLDKKDGERN 240
  241 ILVFDLGGGT FDVSMLTIDN GVFEVLATNG DTHLGGEDFD QRVMEYFIKL YKKKSGKDLR 300
  301 KDKRAVQKLR REVEKAKRAL STQHQTKVEI ESLFDGEDFS ETLTRAKFEE LNMDLFRATL 360
  361 KPVQKVLEDS DLKKDDVHEI VLVGGSTRIP KVQQLIKEFF NGKEPSRGIN PDEAVAYGAA 420
  421 VQGGVISGEE DTGEIVLLDV NPLTMGIETV GGVMTKLIGR NTVIPTKKSQ VFSTAADNQP 480
  481 TVTIQVFEGE RPMTKDNHQL GKFDLTGLPP APRGVPQIEV TFEIDVNGIL HVTAEDKGTG 540
  541 NKNKITITND QNRLSPEDIE RMINDAEKFA EDDKKVKDKA EARNELESYA YNLKNQIEDK 600
  601 EKLGGKLDED DKKTIEEAVE EAISWLGSNA EASAEELKEQ KKDLESKVQP IVSKLYKDAG 660
  661 AGGEEAPEEG SDDKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle