YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03951
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGRFSGKVA IITGSSFGIG RATALLFAKE GAKVTVTGRS EERLQGSKQA LLDAGISDSN  60
   61 FLIVPADITT SSGQDALISK TLEKFGQINI LVNNAGASIA DSQNRAGLDQ GIDTYEKVLK 120
  121 LNVQSVIEMT QKIRPHLAKT RGEIVNVSSV AALKFAHVRN PYYPLAKAAL DQYTRSAAID 180
  181 LISQGIRVNT VNPGVVATGF HESCTGLSTE ESQKFYDKVG ANKSAIPCGF SGRPEHIAKA 240
  241 IAFLADRDSS EYIIGQNIIA DGGTSLVLGF HAQLPQK

Type	Start	End	Confidence
Signal Peptide	1	24	0.73
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	277	0.98