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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cht-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLGKFLLVA SFILPIAYTW TGATIRNHPA DVVAARNKIT SRSVARSEPT NSYIRPCYFT  60
   61 NWAQYRQGRA KFVPEDYTPG LCTHILFAFG WMNADYTVRA YDPADLPNDW AGEGMYRRVN 120
  121 KLKVTDTQLK TLLSFGGWSF GTALFQGMAA SSASRKVFID SAITFVRTWG FDGIDIDWEY 180
  181 PSGATDMANY VALVKELKAA CESEAGSTGK DRLLVTAAVA AGPATIDAGY DIPNLAPNFD 240
  241 FILLMSYDFF GAWASLVGFN SPLYATTELP AEWNGWNVDS SARYWNQKGM PKEKIIVGMP 300
  301 TYGRGWTLNN ASAINPGTSG SPAKITQYVQ EAGVGAYFEF CEMLANGATR YWDSQSQVPY 360
  361 LVQGNQWWSY DDEESFANKM AYVKREGYGG AFVWTLDFDD FNAGCSNSNG QLYPLISVIA 420
  421 KELGGVIIPK KGGVTTAPTT VATTVTTGRP PMTSAVTTTT AATTTTTRAA TTTTASNTNV 480
  481 CSGKSDGFYP NSNNCGLFVL CLSSKSYSMS CPSGLQYSAS LKYCTTSTAS GCSVTTTRAP 540
  541 TTTTKSAPTV TTTTRAPTTT TPAFKCTKDG FFGVPSDCLK FIRCVNGISY NFECPNGLSF 600
  601 HADTMMCDRP DPSKCAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle