YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03786
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVHSTHLL QHPHFYSFHP SRMLSIGILS ICLVGLAGAQ LDAFALPSAQ RYAPKPTVPP  60
   61 EFSNYFELDG HARELVDSLL GPRPGGLFPE KTFEIGAPQG PVQNGNQPTH VVSSLEKTLE 120
  121 SFFTAPELPA GQALPPGFGS GFSVANNNKA LTSFGDIRRS PSGKKENQEV EGSGAVENSI 180
  181 AGIPNVFLKL AKQPTALVDA FNKAVSVPRD SSGNPVFETA PVVPEGGFLP TSEVRRSPSS 240
  241 VSEVSHSIDS KSDELNTEEY GGLSEDSNSS GGGLIGTIFN LIKLGGKKAK ENAKNGNGTA 300
  301 PEKNTIGKAV SNLLSGENSP FPKPGSNILT DMLFKTLSSG SLESNGTEIE KSENGSIVLT 360
  361 PAQSAAISSN LEMIQDLIIK PNSPLCTQKP IPVEFELDPL MGQWYQVIYS PPVSTGPCSM 420
  421 VSYKKLSDNG EATGSIVDVY EYTTDGTPYG KPIISSGYAL VKGKGELIFR TNSNKEDVTV 480
  481 HILSVGPLNH QGEYEYVVMS TNCNYPVYVF ARDTSIFKQK YEPVVNEFLD KSGIVNGISR 540
  541 LLNVVAPVDN TMCIFPPHLF YNQGR

Type	Start	End	Confidence
Signal Peptide	1	39	0.60
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	565	0.98