YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	rol-6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTTATSGA IVFSGATLLV SLFAAASLYS QVSNIWNELD AEIANFRSLT EDMWVDMVKL  60
   61 GAGTASNRVR RQQYGGYGAT GVQPPAPTPN PYGGYGASQP APPEKFPDGI PNGGNQPKFP 120
  121 GGGFPDGPFP NGGGPRGGNQ CQCTVENSCP PGPAGPEGEE GPDGHDGQDG VPGFDGKDAE 180
  181 DVQNTPPTGC FTCPQGPLGP QGPNGAPGLR GMRGARGQPG RPGRDGNPGM PGDCGPPGAP 240
  241 GSDGKPGSPG GKGDDGERPL GRPGPRGPPG EAGPEGPQGP TGRDAYPGQS GPQGEPGLQG 300
  301 YGGAAGEDGP EGPPGAPGLP GKDAEYCKCP GREGDAGRSA RRHRKFQL

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	348	0.99