YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pdcd-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSSSSEPS TMATLFPNFR DQEVQSAVKN LLTYSLVILI VPLASMFLLK QFFFEGLLGV  60
   61 SANDALTYSA IIAVVLVHVV LGIWLFAATK QEDRKKRENK QD

Type	Start	End	Confidence
Cytoplasmic	1	29	0.98
Transmembrane Helix	30	49	0.92
Non-Cytoplasmic	50	65	0.82
Transmembrane Helix	66	88	0.93
Cytoplasmic	89	102	0.98