YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ant-1.3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGGGDSKPI EKKKEDKKGF DTRKFLIDLA SGGTAAAVSK TAVAPIERVK LLLQVQDASL  60
   61 TIAADKRYKG IVDVLVRVPK EQGYAALWRG NLANVIRYFP TQALNFAFKD TYKNIFQKGL 120
  121 DKKKDFWKFF AGNLASGGAA GATSLCFVYP LDFARTRLAA DVGKANEREF KGLADCLVKI 180
  181 AKSDGPIGLY RGFFVSVQGI IIYRAAYFGM FDTAKMVFTA DGKKLNFFAA WAIAQVVTVG 240
  241 SGIISYPWDT VRRRMMMQSG RKDVLYKNTL DCAVKIIKNE GMSAMFKGAL SNVFRGTGGA 300
  301 LVLAIYDEIQ KFI

Type	Start	End	Confidence
Cytoplasmic	1	186	0.78
Transmembrane Helix	187	207	0.83
Non-Cytoplasmic	208	226	0.82
Transmembrane Helix	227	248	0.93
Cytoplasmic	249	313	0.76