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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: spe-41
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGKEKKEST RLKLSAIKEY LGKYRGVDAD NNEGYDGHQK WHENDQVVLQ AMAYFYKAVK  60
   61 SKLYSEVRSF LGILLPHGPD DGRLSSLQSL LMDTSSEESL KEALLLSIAV GSRPLVEFVL 120
  121 VLFVDAPYLE RSGSANSPHF PPHMTPLMLA CILNNFSIVQ CLITRGHCIQ IPHFITCECK 180
  181 TCKRETVTTH SSTRLVDVMR ALSSEAYLWL ATDDVFAATC AVARDLQQLA SDDQLEYVET 240
  241 YRDLEMNVQR FLCRISDQAW RVDEFNMMVA NRNYCPERMT EISSPRLQMA MDSQMRQFTC 300
  301 STNSQTTIKS VFRSDWYNYG IKPKRDAWRF LRACILMPFL VMLHAFMPTK GTTMCVPLAR 360
  361 FIAHITMYLV FLIAAILRPT IGFYFAWTDS IEVTVQALEI FMYAYVMGLA LEKGILFYRV 420
  421 GRDGFFAFWW RWFDAALIFI FLFSLIFFTG KWGKREAFDP SSVDRMHWPS FEFSLLHEIC 480
  481 LAIACVLSIL KCFYYAQMMK SIGGSVISVG KCVGKTYTYI LIMVAIIVSF SVGLNIIVDP 540
  541 YLNRSTMKIG DQDYTKTTDS YETIGTSSKN LFWSIFGYLG PSTFTTVVGN TGPNMDPVKH 600
  601 TLNSSTFEIL AAVYHGILII TVLNLMTSIL VKGADEVLDN EEMEFKFTRA AIYSEFLSWE 660
  661 MAAPPPLNLI LVVAHFVHRN LLKRYYASPA WGEKPANDDV EDQAADEQYM QLLMVVFARF 720
  721 VASKECKYKS IWRSEFHREE KQPPRVTFLT TGAHSFLMDN TFEGFKMRSS RTMEAEGYKE 780
  781 YTTVQYYVPK SKTPGPAAAA DAGTKVAPKD DKPQNNPVLA RTGIDSPVPS SKQVMSSELS 840
  841 ASIPRARDVT FLGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle