YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE03263
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPVADPPRA GPEDIGRNSR QSTIRGVPAF PVSEPKHTSA PIEFVDDDEI KKEYRPSCFD  60
   61 KLIDFILCRG DVAKRTYETQ PVSIFGLFRY AKAFDHFLLF IGVICAIISG VSQPVLTIIA 120
  121 GRVTNAILVY APQTKQFRNK ATENVYIFLG IGIFVTITNY IQYMCFQHCC SRIMAQMRHR 180
  181 YVYSVLRQNA GWFDKHHSGT IATKLNDSME RIREGIGDKL GVLLRGVAML VASVVVAYIY 240
  241 EWRLACMLLG VAPTCIGCMS LMARQMTATT VKELGGVEKA GSIAEESLMG VRTVQAFNGQ 300
  301 EEMVERYRVE LNKGRKFAIW KGFWSGLFGG MFFFWLFAFQ GCGFLYGAYL LSVGIIKSPG 360
  361 DVFIIVMAML LGSYFTGLIS PHLMVLLNAR VAAGSIYETI DRVPKIDPYS KKGKFLDKVI 420
  421 GRVKFENVHF RYPTRKDAKI LNGLNLTIEP GTSVALVGHS GCGKSTSVGL LTRLYEPEAG 480
  481 NVTIDGTDVR ELNIDYLRNV IGIVQQEPIL FNDTIHNNLL LGNPNATREK MIEVCKMANA 540
  541 HDFIEKMPKG YDTMIGDGGV QLSGGQKQRV AIARTLVREP KVLLLDEATS ALDAQSESIV 600
  601 QSALNNASKG RTTIMIAHRL STIREADKIV FFEKGVIVEA GNHEELVRLG GRYYDLVKAQ 660
  661 AFKPDNDGTV DEIEDEIDLG QSASGLHSRQ SSFTSSIRSK MSGAEAFRRG TLGADSFAGG 720
  721 KSTARADAEN AAFAEEVAKV MEQDGQISAG YMDIFKNAKG NYTVMFLGFV TGLIRGLELT 780
  781 AFALLLGWVF EGFQYLNIDN GKMMHRMAMA VIAYGCSGFG CFISQFLSSI FFAIVSENLA 840
  841 LRFRVMSFRN LLYQDASFFD NPAHAPGKLI TRLATDAPNC KTVVDSRMLQ VLYALSAIIA 900
  901 NIVISFIYCH SGNCTHYFTR FYNKRSELKK GLIEAINYTI TQSFMYYMMC FCFALGIRLI 960
  961 YHGNKSPQDV FQGNIAMLLT AMGVMNAAQY FPEFVKAKTA AGLLFNIIYR KPRTGDLLEG1020
 1021 SRPEVRGNIL FENVKFSYPQ RPHQPIMKGL QWTALRGQTV ALVGPSGSGK STCIGMLERF1080
 1081 YDVTGGTLRI DGQDIRGLSL FHLRTQMALV GQEPRLFAGT IKENICLGLE NVPMEKINHA1140
 1141 LELANANRFL ANLPAGIETD VGEKGSKLSG GQKQRIAIAR ALVRDPKILL LDEATSALDS1200
 1201 ESERAVQEAL DRAREGRTCI TIAHRLSSIQ NSDVIVYIEN GRVQEAGNHK QLMSKKGKYY1260
 1261 ELIQKQDLGI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle