YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lips-10
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLFKSSLLL LIVIFGCAHA KFHTHFYNFL LGKFGKPIAD DLLRPDLGTK GSFGGGNPNA  60
   61 TGLPIVVIHG LAGYAGLSKK SLLNKYYSYG QPKGTVFATT YARGKLMDSL QHGMQCDYVL 120
  121 KVRTLILAVH EYTQKPVNII ACSMGSPITR KAILGGHCVD SGVNLGRPIN HLIHNYVSVG 180
  181 GANHGAIMCA KQPFVNGICS LTHGLDCRSK FLQEINSQPF QYGKNMFAIY SVADEVIGLR 240
  241 NTCGEMSSPL EGATSIVKTR LMHGAVIGGT TEDQWRALQT S

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	281	0.99