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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE03205
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRFPLILAS VCWLTTAQQQ NVANDPDKKL ASFDACKADI HKHCSRPDVD LTSDMSILEC  60
   61 LQDAGFSETA TLSEQCEQLV WDFKVKITQD ERFVSAAKQY CEEELKGNAA MNLCTSQTQP 120
  121 GFALSCLMEF TKNVTETGKC HAFLARTERL AFSDFRLVGP FVTKCRAILD KFKCNVLTPD 180
  181 PAHKGVRVAH TQGMALECIL DKVVKNAKTQ ADALQILGDD CKHEVLRLAE MQADDFHLDR 240
  241 PLFFACRLDR ERYCKDVPSG EGKVFECLMM NRNDKFMDPE CGNLLAERAY LMGRDYRMAH 300
  301 PLTKACQPEL TRYKCEPQNQ IESAAHFHLA WILLCLENGA NQPEHKEVQP SKECAHEMIT 360
  361 HRQMMMQHFR MAPELVLNCA QEIDKWCSPR GDIEAEGRTL HCLMEHAESR NETLKLGAQC 420
  421 LQAVQQVVKV ADIGRNYKVD KVLYGSCRSL IDGPCAQDAV SETATLTCLM RNVDSPDMVP 480
  481 ECEKRLLEVQ YFMARDWTMD PQLYEACHQE AVSRCSALDN WHQQHNSDNT VDRGPQVLAC 540
  541 LYRSAYDEQN PLSVKCGTQV RQLLHVRAVR VNLIPEIEDS CREALSEFCS HNVKPSEEMM 600
  601 CLQQNFETDN FKRKHPQCFA ELTKFTEMEA KDTKLNRALS KACKPVISTH CAQFANEEID 660
  661 HGDVLECLVN NKDAKEMNNK CRSYVNHFEL ISLRDYHFSY KFQKACASDI EQSCKGHNND 720
  721 KGEIIRCLSE VRFEHKVLGS PKDLTDDCKK QLKVAYLQQE QVEFDDKEHM ADADPKLSQK 780
  781 CEQEIKMYKC NQADTFEDTI ECLRLNFEHL GPECKSMIFY REKIEAVDNS MDDELQKKCR 840
  841 YDIGKFCANS DSENVLECLT NTKIVRLLQR ECKAIVKERM QESARDVRLR PQLLTSCRKE 900
  901 AEQYCPEDMK KINMPQYSQT VLDGVVVSCL RDKFRQSISD QNHIDFSPRC SAEVSRAIVE 960
  961 AEFDPQLDPP LYNACKSTIN DHCSATIMES GGHFDNVMEC LKNDFNKGLI RDKQCSEQVA1020
 1021 RRLQESLVDI HLDPVLHEAC AMDIQRYCRD VPPGHSRIVM CLMDSADKQE LSKECSTKLS1080
 1081 DRNKLWMKAH SEFQMALPDS WHAFANLVME HPERNSILGY LAGFIVFILL IGCCCGRVSK1140
 1141 KQYIEMKNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle