YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03141
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFIDKLPE ISRESKMEIT LLFFLTVEMV IVWISYLFIN PVENFIYNIW MFHLLIALFL  60
   61 SVFCKTLNFA IYRAGFRLLH MCYNVYILYT LGYMIVPFHI SLYFLFEFTY TVYGISYKQM 120
  121 DYPTTWIVIS LQKCGSRGTG PMHNSPIYPF TSVACETIRK ECILNEEKLD DSDGYYSALE 180
  181 DVLFPVVTPT NKLSERLIV

Type	Start	End	Confidence
Cytoplasmic	1	18	0.98
Transmembrane Helix	19	39	0.94
Non-Cytoplasmic	40	48	0.82
Transmembrane Helix	49	69	0.92
Cytoplasmic	70	81	0.80
Transmembrane Helix	82	103	0.85
Non-Cytoplasmic	104	199	0.91