YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03132
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRFSKKVA IITGSSSGIG RETALLFAKE GAKVTVTGRS EEKLEETKKA LLDAGIKESN  60
   61 FLIVPADITF STGQDELISQ TLKKFGRINI LVNNAGASIP DAKKRTGIDQ GIETYEQVMK 120
  121 LNVQSVIEMT QKVRPHLAKS RGEIVNVSSV VALKAGWTRT PYYPLAKAAL DQYTRSAAIA 180
  181 LISEGIRVNT VNPGIVQTGF QANASGSSSD DAQKFYDDMG SNTTAIPCGF AGRPEHIAKA 240
  241 IAFLADRNSS EYIVGQNIIA DGGTSLVLGI HGPAGGKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.67
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	278	0.98