YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE03066
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIHDELQKQ DMSRFGVFII GVLFFMSVCD VLRTEEHSHD ENHVHEKDDF EAEFGDETDS  60
   61 QSFSQGTEED HIEVREQSSF VKPTAVHHAK DLPTLRIFYC VSCGYKQAFD QFTTFAKEKY 120
  121 PNMPIEGANF APVLWKAYVA QALSFVKMAV LVLVLGGINP FERFGLGYPQ ILQHAHGNKM 180
  181 SSCMLVFMLG NLVEQSLIST GAFEVYLGNE QIWSKIESGR VPSPQEFMQL IDAQLAVLGK 240
  241 APVNTESFGE FQQTV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.83
Transmembrane Helix	12	32	0.76
Non-Cytoplasmic	33	255	0.73