YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02997
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRADLNSTS IPLLRIQNIT RKTNRFAQWK NLINPCLILI AILVISAPVA FSLSELIMVA  60
   61 RHKSETVSNL INMLIPSSQT SRTTMKTNNS PTTKLVQKSN EKVSPPAASC GKRIVGYFAE 120
  121 FENSPLSKKQ LQMLTHIIYL FAIPKNGSLT FRDESSRRKF VAMKNEARKE SSTLKVMISI 180
  181 GGQYSSGEFS GLVSKETSRN LFTNSIVSFV QNYDIDGVDI FWTWPKYSDE NNYLMFIREL 240
  241 RYAFTELQKK LNRKETFVIS LVISRNVNHL SNLVEFSNFV DFLNIYLFNS FLNQIGPDSP 300
  301 LYGGGSRIVD ENMKYYICKS GQPSKFNIIV SFHATYWNGA ELPLRDDSDD IWKDNNSGRL 360
  361 PIALPRRQLR QYNWNLTDIK FHNLTKTSYI WIPGPPTRFM TLEEERSLRE KNRYVADHNI 420
  421 GGITMWTIDQ DDDDHTLLKV VSSAELCTGD EKNTIKYKCE

Type	Start	End	Confidence
Cytoplasmic	1	30	0.80
Transmembrane Helix	31	51	0.76
Non-Cytoplasmic	52	460	0.98