YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02925
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEDVLPKW VVLWLFVSGM ICTYDVAYTM NRPYTNDPAS PKANLLFGGW ALYSSVDRHY  60
   61 LTTNDVFTCS TGRVMLLECL LNFIAIGLAF ARSRHGLLLA FTSNVMVLWK TILFFSVFLG 120
  121 QPEGHLPPMN PNKFVWSKFM IFWIPNGVWV LMPTLVLFAL WNKLALPPKM SEKYWKASNK 180
  181 CRGDLSFGDQ KKIALE

Type	Start	End	Confidence
Cytoplasmic	1	9	0.85
Transmembrane Helix	10	28	0.92
Non-Cytoplasmic	29	68	0.85
Transmembrane Helix	69	91	0.81
Cytoplasmic	92	97	0.82
Transmembrane Helix	98	120	0.88
Non-Cytoplasmic	121	140	0.89
Transmembrane Helix	141	161	0.95
Cytoplasmic	162	196	0.94