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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: fzo-1
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTASLVHT LPASGDSNHR GLHSLKNSRR AADNEPLLRF REAKKVLGDV YGELKDNVAE  60
   61 LEGVYKDIKE NDFVSSEQRE EIEAIGDSIK TIMDTFQRDN MKVVFFGRTS NGKSTTINAM 120
  121 LHEKVLPQGM GHTTCCFLQV EGSEGEVGHL QLDDNPQKID MKMLGKIGHA LSDENSDLPA 180
  181 MGQDSLLKVF HPKKSESGEC RLLQNDVVIL DSPGVDLSPE FDSWIDKHCL DADVFVLVSN 240
  241 AESTLTQAEK NFFLRVAKKL SKPNVFILNN RWDASAAETE NIEDVKKQHL TRFRQFLVDE 300
  301 LEVCSEREVN DRIFFVSSRE VLESRLKARG LVQKAYQAEG HGTRALEFQN FERHFEHCIS 360
  361 RSAIHTKFEA HNRRAHEMIG KMRLNLNSVL TSAAEQRSKL QNNLNESTRT FNECRVNFTQ 420
  421 FEKAYREQTE QLRAEVHLKV SADFFEEIAR LDAIIDRFEQ PFDGSSSGMT KYKEDLAIFV 480
  481 DKCLSSDLEA RCTGGLMSRI WNLENDMFQY VTKILAEPYQ NKLEEVWRYR APFKFSICVD 540
  541 VPALVNDFHE DLEFRFTFGL HAIIRRIIAY RSGQPVTAIN TNLLTPLSLK QQSEKNSVRD 600
  601 AEASAASEEQ AMMTQMVLTS AAFLANGSLG VLVVGGIVYK AVGWRVIAVG GAAYAGLYAW 660
  661 ERMRWNSGAK EQHLKEQFRS HLAARMQQVS TAHTHHCETQ AIREMDQVFD GLKATVGGVH 720
  721 REMKNDLDVQ KTQIDAVDST IRTLGTIKGK AVFLLRNLEQ FASSYLRSDS PPTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle