YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	clec-140
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFSFIFLVL VYLTFAFGDS LICNNGFTVV NSNKCLKLFS SAVKHRTAEA NCASYGGTLV  60
   61 NIRNSIDNRA VTQFVGNIGL SFWIGVYCLE SNNPSSCYFD DDLGTDTAFN NFAKGFPNTD 120
  121 IGGCVYSATS GSLAGQWISS ECDNVEMAYV CEIPMTRADS CAHNYNGYCY IMSHENSTSP 180
  181 ILSFNDAYKS CQDNCANLVS IHSRRELSYI QGIYSPFNIS SVTIGGLSTA PMAPYWSDLS 240
  241 H

Type	Start	End	Confidence
Signal Peptide	1	18	0.94
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	241	0.95