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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: snt-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLDFSSQD EENDEDLTKE FVRDEAPMEE TTSEAVKQIA TTTKETLKDV VVNKVIDVKD  60
   61 VVKEKVMQQT GMPEWAFVFL GFVFILLVLA CAFCLIRKLF GKKRHGEKNK KGGLKGFFGK 120
  121 GQDVVDGKNI QGMAQDLEEL GDAMEQNEKE QAEEKEEVKL GRIQYKLDYD FQQGQLTVTV 180
  181 IQAEDLPGMD MSGTSDPYVK LYLLPEKKKK VETKVHRKTL NPVFNETFIF KVAFNEITAK 240
  241 TLVFAIYDFD RFSKHDQIGQ VLIPLGKIDL GAVIEEWKDI APPPDDKEAE KSLGDICFSL 300
  301 RYVPTAGKLT VVILEAKNLK KMDVGGLSDP YVKIVLMQGG KRLKKKKTSI KKCTLNPYYN 360
  361 ESFSFEVPFE QIQKVSLMIT VMDYDKLGSN DAIGRCLLGC NGTGAELRHW MDMLASPRRP 420
  421 IAQWHTLGPV EEEGDKKDDK K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle