YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tsn-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDAAAATPT VPPPAASSAN PAVRRGLVKS VLSGDAVILQ GQPHNGPPPE WTVYLSNVTA  60
   61 PRLGRRPTDS ASATPDEPYA WDSREYLRQK LVGQFVTFVR DFTATSGRDH GRIYLGGTSP 120
  121 ADAENVAEGA VSAGLLEVRQ GKVADEYSTK LLELQEQAKS AGRGKWNSNA GTIRDIRWVI 180
  181 DNPRELVDKY AQKPIDAVIE MVRDGSTVRA FLLPNFEYIT LQLSGVRAPS TRNPNAADSR 240
  241 AEAFSEEAKF FAESRLLQRD VQIILESTSN QNFVGSIVHP KGNIAESLLR EGYAKCVDWS 300
  301 IGLCTGGAQK LRDAERQAKE KRLRLWKSYQ PTSSAYSGDR KAFTGKVVEI VLSDAVVVQK 360
  361 DDGSEVKLHL SSIRLPRESG DDKATGGPGR QFRPLYDIPF MFQAREFLRK RLLGKKVQIQ 420
  421 IDYVQPKSEN FPEKTCATIK IGDQNIAEGL ISRGLSKVVR HRADDENRSS EYDTLLAAEA 480
  481 NAEKGKKGLF ADKTAEKKDT HRIQEITGDL AKAKQFLPYL QRGGRAEGVV EFLSGGSRLR 540
  541 IYIPKETVLI TFLLGGINCP KGARVGPGGV STGAAEPFAD EAAAFTRKLV LQHEVQLEVE 600
  601 STDKNGNFVG YLYVSPDGNT SRAINLSEAL VENGLASLHF TAERSGHYNA LLSAENKAKK 660
  661 AKKNIWANFT EEQHQEEVEV QQADTSERKQ NFRQVAVTDI APGALRFSAQ NIEDGPKIEK 720
  721 MTTEMRQALA EHPPLAGSYT TKRGDLCVAK FSQDGQWYRC KVESVRAGQA EIVYIDYGNR 780
  781 ETIEAVKLAQ IPAGFANFPA GVREYNLALA KLPNEDYVQL TSDAFAQYLF GHSSVFINSE 840
  841 YKVGTSEYVT VYYDSGNKKV DIGKSLIAEG LALADHRREP RLQTLVNDYN TTEEVARKSR 900
  901 KNIWEYGDFT GNDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle