YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02530
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAFVVGAT GAVGSELVKL LAESTKFSKV VVLARRPVDG ATGDKLIQKT VDFDKLEENA  60
   61 EDIQGVDVAF CALGTTRGKS GADGFYKVDH DYVMSAAKMA KENGVKQFVL VSSVGADASS 120
  121 RFLYPKTKGE VEKEIGELNF EKFVIMRPGL IEAKRPEFRI GEFLGKIVTA PLGLFSNRFS 180
  181 SSATAIAQAM INATQTEETG NQIWNNSKIV EESKKYTA

Type	Start	End	Confidence
Signal Peptide	1	15	0.62
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	218	0.98