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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE02524
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVIGNITDL SPTVSGIPDE CGLEPHDFLE VKFFLISVVG TLIGLFGLFG NATTALILTR  60
   61 PSMRNPNNLF LTALAVFDSC LLITAFFIYA MEYIIEYTAA FDLYVAWLTY LRFAFALSHI 120
  121 SQTGSVYITV AVTIERYLAE FSRLIFQVTV NPSCPDGSNW QSYILLPSAM ASNPIYQQVY 180
  181 SLWVTNFVMV FFPFLTLLLF NAIIAYTIRQ SLEKYDFHNQ KSVVAALSAS VNLPRNIAGY 240
  241 CPSDCLCHVP LSSFTLRGLA PRRTVVYDCS RGSASSVATS LTSPESFRIS SRNELKEKSR 300
  301 EATLVLVIIV FIFLGCNFWG FVLTLLERIM GQETLMVEHH IFYTFSREAI NFLAIINSSI 360
  361 NFVIYLLFGK DFRKELVVVY GCGIRGISLR LPVQDKFVIW RHWKRTKSRI SMNTTNRTRH 420
  421 KISLPQTLVE HANLERLEET RFLAHHEDGV QTQVSPIHAL RNGSTPKIDT LQDLTSNGRP 480
  481 CKTSIIDDNG TVGKPRCNAF SIKIYLSLFN AQKMKILVNI LILIRITSGM LYDGKYFDMK 540
  541 DRIRAECIIK KAMSDYKYLG NNDKSVNGEP CVPWIEVTES WLPTASDSQK MKKQASESFH 600
  601 HSKCRNIKLS VVNPMYSVST PSAIETGIPS GIHGPWCFID KVGTNGTESF KYTPVTCFNY 660
  661 CDETKVATDN EKMRLTENGY AILKQNYNPA LLDPIEKLFT EYQFGNMKYY TFKKSREQPP 720
  721 QYLELRQKVF IALCLVFCVV IAWILSCYFL KKHSQKLHQK KQKALEGFYE SNNLADIKLQ 780
  781 ADLRREREEA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle