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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494788
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVINEQLTS SFLKFSHISS SSFCYYFFPF SFILNFQETL EMRIIYLIST VLLIYTNATV  60
   61 LRTKESIQNK VTYDKYGFQP LCISCTGLIS VASFFLKFDV SEPVILEFAT IVCKLFAKQP 120
  121 WAVCDGISSQ FRDEFFYVFR RLANESPSQI CGIILPDCAD PTDPSESGWM VALPPKPKRT 180
  181 RISKKKVQKK PNMSMSQNLN VLQLTDLHVD FEYKYPSEAN CDDPVCCRVS VSEPKKAAGY 240
  241 WGSVGKCDIP FWTVENMLSH INKTHMIDMV IMTGDYINHV DWEYSIEEHL SVLRKLHRLV 300
  301 QNTFPSTPIY WALGNHEGVP VNSFAPHSVD ERFWPTWLYK EFQTMSGPWL SEGAKDSLLK 360
  361 RGSYSTQVMD GLKLITLNTG FCEVTNFFLY LNQSDPDSSM SWFVKELFES EKKGEQVYVL 420
  421 AHIPPGDSEC LEGWAFNYYR VIQRFSSTIA AQFFGHDHLD YFTVFYEDMH NVSSKPISVG 480
  481 YASPSVTTFE YQNPAYRIYE IDPYNKFKIV DFTTYYADLE KATEDKKPVW EKLYSARQAH 540
  541 GMDDLSPLSW NKVIQKLFTS EKKREKFYQY AFRNFSPQCD STCQMQLMCN LRMGHHNSTL 600
  601 YCPTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle