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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-5
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLYFSMVL LWVLGASECQ VIPSSRRTLR VGIAAAQDTQ SGSIGWASCG GTLPIAVQYL  60
   61 KSKGFLTDFD VEYYMEYTEC DRASVAKAGM KFMKEMNVDV VVGPSCGDAL AIMGTLSAIY 120
  121 KKLVLGWGFV SDTQLADTNR FPYVASVQPT AQTLGLATSR ILEMFQFDRV ALLYYKDDQD 180
  181 YCKSVMDDVE ATLSDPDLYP VRIVWKGELQ SDNEALTRST LQAVKSRARI VLLCAISGPE 240
  241 KRNYLISIAQ QNMTTNEYVH ILLTMRSIGY GVQTSLGKKT FANGLTPLWE SFTVAPDGNE 300
  301 TNARRAAEKM LVIDVNSDVQ DAEFLQYLTK NIADAVRNPP MKCNTSECIN ASSTSMGSYA 360
  361 RHLFDVFYLY GMAVSKLNST DPTVYGNLNL LMPQMVTSFD GMTGRVQIGQ NLYRVPTYQL 420
  421 YGLDEKYEQV ALVNMTFYNS SSQLSRGYSD EGRSVWHFWD GTRPLDTPIC GFSGRYCPVQ 480
  481 FWDQYGVLIF VASIVLIFLI CIMLMCFGFM IRGRRAEQER LNSEWQIPSI QLIMPQKEKR 540
  541 KPNSRRSLQS GPSTITGESK MTIDGGFHEN YTVQMFEKDL VLTTKHHSMQ MNKEEKEKFV 600
  601 KLRKLEHDNL NKFIGLSIDG PQFVAVWKMC SRGSLQDIIA RGNFSMDGFF MFCIITDIAE 660
  661 GMNFLHKSFL HLHGNLRSAT CLVNDSWQVK LTDFGLGALL EEHTPSKKRL LWAAPEVLRG 720
  721 SLTIHQMDPS ADVYSFAIIA SEILTKREAW DISNRKEGAD EILYMVKKGG NRTIRPELIL 780
  781 DAEVSPRLTT LVKDCWSEQP EDRPKAEQIC KLLSEMTPRG NTNLMDHVFN MLEEYTSTLE 840
  841 VDIEERTKEL TLEKKKADIL LSRMLPKQVA ERLKAGQTVE PEGFDTVTVL FSDVVKFTQL 900
  901 AAKCSPFQVV NLLNDLYSNF DTIIEEHGVY KVESIGDGYL CVSGLPTKNG YAHIKQIVDM 960
  961 SLKFMDYCKS FKVPHLPREK VELRIGINSG PCVAGVVGLS MPRYCLFGDT VNTASRMESN1020
 1021 GKPSMIHMSE AAHSLLTDHY PHQYETSSRG EVIIKGKGVM ETFWVLGKTD SDTKSLSTRT1080
 1081 TPPITDENWP PQMKEDLKKR AVTPYPERQR SGKSKMDTLK VV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle