YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE02295
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAISLFKPE DEKAPISHVE HHPLAGNHCS EHACREQKRF NLQKRHLVLF TIWLMFIIFV  60
   61 VPLFTKLQAE KVSRRAHTNE RGIQNIAKEY IAYTEKFDKS YATSQESLKR LNAYYNTDEN 120
  121 IANWNIQNEH GSAEYGHNDM SDWTDEEFEK TLLPKSFYKR LHKEAEFIEP IPESLTAKKG 180
  181 ESSSPFPDFF DWRDKNVITP VKAQGQCGSC WAFASTATVE AAWAIAHGEK RNLSEQTLLD 240
  241 CDLVDNACDG GDEDKAFRYI HRNGLANAVD LPYVAHRQNG CAVNDHWNTT RIKAAYFLHH 300
  301 DEDSIINWLV NFGPVNIGMA VIQPMRAYKG GVFTPSEYAC KNEVIGLHAL LITGYGTSKT 360
  361 GEKYWIVKNS WGNTWGVEHG YIYFARGINA CGIEDEPIGI LA

Type	Start	End	Confidence
Cytoplasmic	1	45	0.97
Transmembrane Helix	46	65	0.94
Non-Cytoplasmic	66	402	0.98