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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cct-4
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPAVPAAAA TARQSASGRE RNFKDKDKPE SVRNSNIVAA KAVADAVRTS LGPRGMDKMI  60
   61 QSGNGDVTIT NDGATILNQM SVIHPTAKML VELSKAQDIE AGDGTTTVVV MAGALLDAAQ 120
  121 NLLSKGIHPT TISESFQSAA AEAEKILDEM SSPVDLSNDA LLNKMATTSL NSKVVSQHSW 180
  181 LLAPMAVNAV KKIINSENDS NVNLKMIKII KKMGDTVEES ELIEGALIDQ KTMGRGAPTR 240
  241 IEKAKIGLIQ FQISPPKTDM ENQVIITDYA QMDRALKEER QYLLEICKQI KAAGCNVLLI 300
  301 QKSILRDAVN ELALHFLAKM KIMCIKDIER EDIEFYSRIL GCRPVASVDH FNADALGYAD 360
  361 LVEEIPTGGD GKVIKVTGVQ NPGHAVSILL RGSNKLVLEE ADRSIHDALC VIRCLVKKKA 420
  421 LLPGGGAPEM EIAVKLRNLA QTQHGATQYC WRAFADALEL IPYTLAENAG LSPIHTVTEL 480
  481 RNNHANGNSS YGVNVRKGYV TDMVEEDVVQ PLLVTASAIK QASECVRSIL KIDDIVMAVR 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle