YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE01907
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDQSSMLF FKDPENKNKN HVSHVEIGVP DPIEELQKLQ NRPEPCTVLA VITTLVILVL  60
   61 LIFALGALGL HDISAFKWEP KPQKALRIML DLPCQTKECV KYSAELLELM DSSVNPCENF 120
  121 HHHEKPDHRK AVNVVRRMLS KCAMGKTEEI HQVGRLSSII LPGLPFPLLN NSWTKPSDPI 180
  181 STSNSSTTYS YPFLTKILAH IILHNPDDAG FVGIKPSSDS EFSLFVVKPF SPVLTNFKFR 240
  241 NMYDILKRNA PESSTNGMID LEFDRQRQLN DVIKLQTKLE KIEFKADPEV VNLTEIQRQM 300
  301 PIIDWKRLID SWIPNGYAHL KEKVYGFNTS YYEEINAIIS STPSETIYNF LFLRFSFKFL 360
  361 RTEVASDLED TCLHQLSTTI PGKIVLYGSE EPEALNLLNG MLHTIKDQLK RSLATLKWMD 420
  421 SRGIEEAQKK FNKTKTVFGF TGEDLIDELV GKITPESNYI STLQNVLLWQ TRNMFKSVAE 480
  481 NNVTVFLNSE VFYSVEKNEI TISRALLHYP FMSANLPNYT NFATIASKIL PQMIHIFDER 540
  541 GRFYDSDGNH RNWWNTETER YFQIIVQCFD GMMQNVFGVS VSIGWNAYDS TKEPYATLPG 600
  601 IQQSSDEALF FYSMVKTMCT SDPDNVNEAL ASVPQFNSAF KCNNGTKMNP PTKCKLAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle