YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dct-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDIKRKINF ASGEKTDESV QPQQQTEQSS AQQTTPSAKA VSNPFITPLT ESTPGMSESW  60
   61 VELAPSRTSL CSSVDINMVI IDEKDKDSRL SPVSIAQSPH VEFESLEQVK YKLVREMLPP 120
  121 GKNTDWIWDW SSRPENTPPK TVRMVQYGSN LTTPPNSPEP ELYQYLPCES DSLFNVRVVF 180
  181 GFLVTNIFSF VVGAAVGFAV CRKLIKHHRQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	178	0.95
Transmembrane Helix	179	201	0.92
Cytoplasmic	202	210	0.87