YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE01714
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRVLLSGAA GSGKGTIARM LVREFEPLGF NYFAAGDFIR DHIARGTEFG VRAQSFLNKG  60
   61 EHVPDSILNG AILAEMLKAG PRVVLDGYPR NMSQLKMVEE QAPLNLIVEL KVPRKVLIDR 120
  121 LSKQLVHPAS GRAYNLEVNP PKEEGKDDIT GEPLFKRSTD QLEVARRRLE VYDKTENKVL 180
  181 DYYKKQNKCI TMSGESSKAV FESVAEVMRR DLLTTTPRTA YA

Type	Start	End	Confidence
Signal Peptide	1	18	0.60
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	222	0.99