YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE01516
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKWFIISCC LLTAISYSTY YLFTSNSWIK TVKTHTYSRF YQLIKENTKT QLDRLQEEAK  60
   61 LSGKSLIPPF INFDREYAIA PKYNISICRI KKSMSTLMSG VACVLYDTGK FMRNNRSILE 120
  121 VWSHRFCGEK NEYRRMNEVK WRMGDAHHTF KKIVVIRDPI ARFISFFSNK CIFEAQKYPD 180
  181 RKQCYNCQGN VTCFLEKQYE RFVQHSSDYS RIRPSYEDKH AAPLSWNCEF GKFLKDYKII 240
  241 KLAVDPKDRK NGLANLMNVL KESNVPNSTL RFIEKSALEG ETMHATYDSD AHDVVKKEIE 300
  301 NDKKIREWLK RIYYLDFVIF DFDTTFINS

Type	Start	End	Confidence
Signal Peptide	1	18	0.95
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	329	0.99