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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: acy-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDVGERTP ALGGSCGPSV RAHSSSPRRV PLFERASARW WNPQFRSATL EAQYWKCSFS  60
   61 QLRDRFRSGL IYIAVVIAAW TLYLALFDRT FIQHWIVSLC LCAIIFAMFA FTACAAQYQR 120
  121 FYMPTSFLCT FLICLVTLLI FSAENQAAFM TPVASLATSF QVVLLIYTVI PLPLYLCILI 180
  181 GIIYSILFEI LNKNKIGLEE AGYIKLVLHA GVHLLGVHLF ILTQVRQRKT FLKVGQSMLA 240
  241 RKDLELETQF KDHMIQSVMP KKVADELLKD ASELRRPSAS NDSNCRTSNA TQVDQPLAKM 300
  301 VPEYRKFRPF TMNLMTNVSI LFADIAGFTK MSSNKSADEL VNLLNDLFGR FDTLCRLRGL 360
  361 EKISTLGDCY YCVAGCPEPC DDHACRTVEM GLDMIVAIRQ FDIDRGQEVN MRVGIHTGKV 420
  421 MCGMVGTKRF KFDVFSNDVT LANEMESSGV AGRVHVSEAT AKLLKGLYEI EEGPDYDGPL 480
  481 RMQVQGTERR VKPESMKTFF IKGRINDGVE EEVMQVQEVE SLHSQKSSKK STLKQKWAEK 540
  541 LKMNHTNSYP MRAAAREGGG SLRIKLAERN RSTQLLPKES NSICIMEDNR KSASLQALAT 600
  601 NNFNGSNTDT NNTYSERGVA GSVSKKSVAG SESNSIKGSR SSGLQLSLQD GNSDLNSVGG 660
  661 LDTAISHHHN AASLTRFDTD NNFDQRLAMV IGQGEGGFDK GFWNHHDSLN KWTLRFNEKD 720
  721 VEEEYRAHFV DSSERYTASK KGHVERHKDL MEQGGEKDGI TGSTVNKYRY SGVFIDIIVA 780
  781 TLIFVISGAV AIMSVRPFPL SLIAYFPFAA AILILTIVLI GLPLLARKKS FQCANQWMPR 840
  841 HLIGLLLIFL PIGVAICIMP LCQSGDCANV ILNYRLAFSY VTILAIFAHC NFSQLAAWPK 900
  901 TTAAVFIGLL HIAGVFYCEF NLKHLVEEQD TCNVTAIMIP PIRKGLNYTI ALNSTSARTL 960
  961 SQDFGSPLFI WELLLDVILS IVLVAFLNYQ FETAFRMSFF GDVQARRDTE RMQIVRDQAD1020
 1021 WLLNNVIPAH AVESLKTDTK YSENHETVGV LFASITNWND MYEENFEGGR EFLRVLNEVI1080
 1081 GDFDELLDRP DFTHIEKIKT IGPAYMAASG LNPERKKNML HPKEHLYQMV DFALAVQHVL1140
 1141 SVFNEDLLNF DFVCKLGLNI GPVTAGVIGT TKLYYDIWGD TVNIASRMYS TGVLNRIQVS1200
 1201 QHTREYLLDR YEFEFRDHIE VKGIDGGMDT YLLVGRKGDG IPPSIKDNQE DEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle