YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE00852
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSTCTAAV RGLSTTAQLS KINNVTIIGA GLMGSGIAQV SANAKLNVTV VDSNQSALEK  60
   61 AQQGIANSLK RVAKKKHADD AAAQTALVSS VLDRIKMSTN VSDSVKDADL VIEAIVENID 120
  121 IKRKLFAEVE VAAKPTTLIT TNTSSLRLAD IGLNLKDKSR FGGLHFFNPV PMMKLLEVVR 180
  181 HTETSDATFN QLVDYGKTVG KTTVACKDTP GFIVNRLLVP YMFEALRLYE RGDASMEDID 240
  241 VAMKLGAGYP MGPFELSDYV GLDTCKFIMD GWHAQYPEEV AFTPSPLLNS LVDSGKNGRK 300
  301 SGEGFYKYK

Type	Start	End	Confidence
Signal Peptide	1	17	0.67
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	309	0.98