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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mig-22
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGGRTGIH LLLGFLIGAA LALFFFSSTP SIDLTSSLAA FTSCQNQETE TNVLEPSALE  60
   61 KGRVYKDLSE HWIVHQDDMP APPHNQDATP KVTRTRFAAT ELGTRERVMA AVMAESALAL 120
  121 SINATLGRHV PRVHLFADSS RIDNDLAQLT NLSPYKLNGQ KTHSMVLGLL FNMTVHNNYD 180
  181 WFLLAKDSTY INPFVLLRMI DTMNWNEPVV MGEAAEDGSG RCRLDTGMLL SQPAMHALMN 240
  241 NRNACNNFAL AADDDQLAFE KCIQIATNLT CKPLHQGVRY EVWRGAERAD SPAAHDSIED 300
  301 WKHSPAFKRA LAVPRLLSDA DASALHDYFV RVEMQRADRE IIKMEAELSR LAEQEARETG 360
  361 EAISWPPALP PYAKPPNRYQ VSTWEYFTMT ELFRSEPNQN VRRLEGKDFD DVAEVVVAAR 420
  421 QQVESEEPEL EFVQLRNGYR VFDPRRGMDY MVDLTYRKTV NEMPEVDNRF ESDNEAAHEE 480
  481 SLKEIVVERR VHVSRMIAST QLMNQAPYVK EDTDVTVVIP VASEKDVLPA RKLLARQARL 540
  541 CLFPTEEARK TRMVVAVFPL IESRSVTAIT NDMEELKRRC KRSLLETDVL PVHPAVSTEG 600
  601 KGTAAAAALD DAVDRYGANT IYLLLSPHAD VQKEFFDRAR INTIKHYQVF FPVPFVEYHP 660
  661 TISGMEMTEK EEKETPTEQA REAALSRLRD GVEPKRKRTL IVQKEHGRFD SQDFSCFAVY 720
  721 GVDYVTARAK FGQNERRNDL ISAFLGQDSI HVLRAVEPTL RIRYHKRSCD MESIDTEDIA 780
  781 RCLDSKKENV AAKDQLAKLL FHEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle