YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE00672
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTPEQEQD FELIDGAERK SSTSDSFEAV DEKKNGSQSV SENEDDNADK SAKEEDDEVE  60
   61 EEMKLPFVDQ SIKDDANRPK EKDGEDLVEE ALKAPIRPDQ EQFYTAEHSN RAITLLIAFS 120
  121 AMMFTLPLLV MASLYYWVFI DHFHLPPAEA MLYAGVCAAL VVILIAAAFC YIAWKEEKDA 180
  181 EDKLRAEKKK E

Type	Start	End	Confidence
Cytoplasmic	1	112	0.99
Transmembrane Helix	113	137	0.87
Non-Cytoplasmic	138	150	0.88
Transmembrane Helix	151	174	0.94
Cytoplasmic	175	191	0.99