YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mev-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINIPTAILC RLGARSSISR SFGTSIVTKS EAKTPIQKFG WEYLLKQRSK NRPIAPHLTV  60
   61 YQPQLTWMLS GFHRISGCVM AGTLLVGGIG FAVLPFDFTA FVDFIRSWNL PCAVTAVFKY 120
  121 IIAFPIIFHT LNGIRFLGFD LAKGVNNVGQ IYKSGYLVSG LSAILALAIV FNSCQNKSNK 180
  181 TA

Type	Start	End	Confidence
Cytoplasmic	1	74	0.75
Transmembrane Helix	75	96	0.90
Non-Cytoplasmic	97	115	0.58
Transmembrane Helix	116	139	0.71
Cytoplasmic	140	151	0.60
Transmembrane Helix	152	171	0.85
Non-Cytoplasmic	172	182	0.52