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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE00567
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPCRAISQ FALDTECLFC VCKLLDFLIL SIFAFFHNIY IFQMSRVISR STPGGTCIVS  60
   61 KDDFLKSFEE VPKMEISSPS DFKEKLDQTI ETLSKGQEDW NKRMNKLKQI RSMVVHGEDV 120
  121 IGREQLLSQL VRLTDCLDLS VKDLRSQILR EAAITCGFLF KRFGTDVRQI AERCLPSAFA 180
  181 QVAVSTKVMA TCGAVLTLFI VEFIQTKQIF TCIASYSTSK DKNQRRQLCA LLEIVLEHWN 240
  241 EKIKRTVLPQ IGELIKAAIC DADPETRVAG RKAFSKLDAL HSTEADKLFA SVDSSKQKML 300
  301 RASDAASSST SINSERGTAP FRSKLSAGSI GGIRNAPNIS SKFLAQRSAS AIDTKQVTRM 360
  361 ATSVSRTPNI RPMTTRTLSK IDTSPGGSKF ARPTVGALGS RTSSNLRARG SVPTSQPGSR 420
  421 NGSPPRRPSA TEAFPAEMQR VKSNLGSNSF VSSLSAEEAT KLQKAMNTAK ESLRQPSRND 480
  481 DDEFLLPKRP TPQKATPQKS ALDTSRVEEV IRACSSTSAN EKREGIKMLA GIVSEPNLSN 540
  541 AEIKSLGAVL NRLLGESTNQ IVLESISSFV KTHHPRLSDW LKLGLGKLFA KKGAEMTLNS 600
  601 KKQISTTISC ILSSFDPTLQ LKSTCELVCD PIHLMSPKSR VVLLEYLNEL LGKYMERGSS 660
  661 FNTKEMKATI LKMFSWMADQ RNEQLITPHG EKVLCSLFAL NNADFSALFN DFNPDYRDWA 720
  721 YKVLQSHGHD QHVPQQDAVS EEACVRATIS TTAAQIEDFV VSRNLDMTPV KSPSTRAISS 780
  781 GFKRVDAEPL RPLSSEMNSQ HRDEELSFNE SFDRLKLNST THLIDDTSEQ SKYVASKLAQ 840
  841 ISGDMGAQQY EGLLSIQTML CEGSFTLWEQ NFAKLLIAVF DVLSKSESDA NKKVALRVLT 900
  901 KMCTSQASRL FDSTEMAICK VLDAAVNSQD GTMNVTADDC LKTLATHLPL AKVVNISQLI 960
  961 LNEEKAQEPK ASLVLKMMTR LFEGLQADEL SPVVDDLAPC VIKSYDSPSS AVRKTAVYCL1020
 1021 VAMVNKLGMK TMEPHLQNLS SGKLNLVQVY VNRAMSSSSH SHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle