YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE00548
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADVKSPAG LAAFNTTLAE QAFATGFVLS GEDAQLFAAL GSAPNASTYP NVARWYANVA  60
   61 SYTDAERKTW ASAGGSAPAA AAADGDDFDL FGSDDEEEDA EKAKIVEERL AAYAEKKAKK 120
  121 AGPIAKSSVI LDVKPWDDET DLGEMEKLVR SIEMDGLVWG GAKLIPIGYG IKKLQIITVI 180
  181 EDLKVSVDDL IEKITGDFED HVQSVDIVAF NKI

Type	Start	End	Confidence
Signal Peptide	1	19	0.70
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	213	0.98