YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	clp-1
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDEEEIIQ KVEVKPDEFN GLIGSIAGNL IRDKVGGAGG DILGGLASNF FGGGGGGGGG  60
   61 GGGGGFGGGN GGFGGGIFIF KIVRQKFPKN SSSFFCVRKH LDSLKTSPCG LDQ

Type	Start	End	Confidence
Cytoplasmic	1	34	0.68
Transmembrane Helix	35	53	0.63
Non-Cytoplasmic	54	61	0.60
Transmembrane Helix	62	83	0.86
Cytoplasmic	84	113	0.94