YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE00217
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKLFVFGS GADDPSHFNY YHCSDLILSS TFSSFSFLIL IYLYIFIFYR LIQSGSMTDC  60
   61 SSTLAALLPT ADFTASLGNS DDHVDVSSFT TTSESTSPPY SSSEHHSPTD QRTETPTSDS 120
  121 GNASFSPENV ATSFESSDRD ASPDNLSTSS AHLNDLQEKG VVVDEELQRQ LLRFHQDFKE 180
  181 SLMENNQNTI NMMSAAFNQQ LFKQTLANLN TVTPQLPVNI PTGLPMPASP CTTAASAPSV 240
  241 ESTPTKRKRQ RRNPVWPYFD VIDGTARCKQ CLYSTKSVFS TNLKVHLRSH HRPDYEKVIM 300
  301 AEDALNLNAL LLSGNTSKLF NVDANRKRMP PMTSSILMTI NKLANQQQNG EENPLNAVLR 360
  361 QTIANNGLQQ HLQNVQTQLQ AAQAAVQKQQ QQQQQQQIQQ QQQQQQQGAI PQFALNAANL 420
  421 AALNQLARNQ MQPTPPPVPQ VSQDNIINTL NFPAHIKQEI MNAPHGTDAN GVPQPKRRRL 480
  481 RRHPVWVYFK DLEDRMVGCT NCEFRTGSAF STNLKMHLKA HHKDDYEKVL QLEEEMRLEE 540
  541 GCFGPGNKFK TELIDYIRGG GNVTTPPTPN SSSFPSTPKT PQLVQQIISQ SFARSQSPNV 600
  601 IQNGEIKIKK ECEDDMFSGL SSTDKLAALV GIAGQEVKKE EAMPANFEEF RQRLLANSSL 660
  661 SSFLGQSTAQ PIAVDLNGSV IASETKSPCS SNEDDRKQER DKALARLWAD NETLLTNTHF 720
  721 REFVHCLAPE YEIPDVDILA TSLVDQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle