YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC613.08
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPLFKTYLL YILKICSIPC LAYVVNFLVC FVLFTNIKLD VRKMAKRHAE ENEDTVMSES  60
   61 LKVVDTDFIN VDFEFFDPQP IDFHAFKNLL KQLLGYDHTN VNLSALADLI LSQPLLGSTV 120
  121 KVDGNNSDPY AMLSVINLNT RRDEPVIKQL TSYIISRLAK SNSRLENELQ KLLEPNSGSQ 180
  181 VGLIVNERLI NMPVQVIPPM YNMLLEEMQW AINENEPYNF THYLLLSRTY TEIESKLMDD 240
  241 ERPSKKGKKS KKTSGEEVMF FHPEDEQFRE VAIDIADYPF ANQDFNPDAN RVFQDAGIKP 300
  301 QGELLLMTNE DFKNLVPKLM EIYSA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.43
Transmembrane Helix	10	35	0.71
Non-Cytoplasmic	36	325	0.59