YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAPB17E12.08
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFYLNGELI HYSIGPTIIR LFSLNVINFS FLSLSVSFIT HGDNAYLLPA WIAISCFQTA  60
   61 AYIVQDWITS PIIRTLPFRS SSSSSSNYRH NLDFLEITVF AVVPVGIASF FTMVMLIWQL 120
  121 YKYPDSFLVS A

Type	Start	End	Confidence
Cytoplasmic	1	20	0.79
Transmembrane Helix	21	40	0.92
Non-Cytoplasmic	41	46	0.72
Transmembrane Helix	47	69	0.80
Cytoplasmic	70	96	0.73
Transmembrane Helix	97	118	0.93
Non-Cytoplasmic	119	131	0.76