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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC3E7.05c
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRQLRTVKS CFSLQKTHQY RSFWIQSSLR ALPPDVKQNK TEPIPFVPKP EEGSSNKSNS  60
   61 SKFRKRFLLL FLLGITGYSC SVVYCFKDPN FYDYFAEHTP FGKQVLYNVE QSWIGYKYLG 120
  121 GNRIKVDDSS PKLKQNSNNI SKKQNSSRND DTKVKKDTTI ERPESLVVEI VDLPSEVTKD 180
  181 TAEESVWKDI GLDQETGLSV TAIPIITETL DHAHEQEIKD QSLRFESSLN EANELHGKLS 240
  241 KIQQEQEHLF EQRLREKVSE MESKLEALLI ARDEKWQSAF ESEKLRLQKL HEARLQQELF 300
  301 KLASVFESKL KNELTEQAIT LEKLHLQSIK AQVEQERGSR LGRLQELRNS FQQLQELVRV 360
  361 VLHENGRVTR LVDVSNTLDD LNKDMRFHKL SEVRQHVNTL KEATKDDELA ALASRVIEKI 420
  421 VDSGPILDKE ELQTKFDTLS KEIYKTCFLT TESGFFGHLK SIILSQLPAA VFKSPDIVSV 480
  481 KKTLEDARSH LLKDDLDGSV RALLSLSQWP RALSRDWINA CRRRMELQQA IEIIKASATL 540
  541 SSQLEDAQQA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle